LOE

Author

SW

Published

October 16, 2026

Other Formats
Abstract

Notebooks, Quarto.

Keywords

quarto, manuscript, jupyter, reproducibility

1 Introduction

This project is configured for:

  • Quarto manuscript authoring with .qmd files.
  • Jupyter notebooks included as project computations.
  • Publishing from GitHub to Posit Connect Cloud.
  • Reproducible notebook execution on MyBinder.

2 Example Figure

The computational workflow is documented in the notebook set:

These notebooks are discoverable from the manuscript website and can be downloaded by readers.

3 Data Stewardship

This starter project follows reproducibility-oriented practices aligned with FAIR principles (Wilkinson et al. 2016).

4 Reproducibility Notes

Package dependencies are pinned in requirements.txt and Python runtime is pinned in runtime.txt.

5 References

Wilkinson, Mark D, Michel Dumontier, IJsbrand Jan Aalbersberg, et al. 2016. “The FAIR Guiding Principles for Scientific Data Management and Stewardship.” Scientific Data 3: 160018.